Difference between revisions of "Virulence"

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(Created page with "<br /> === Cross references from uniparc: === <br /><syntaxhighlight lang="sqlite3"> select BB.db_name,AA.n from (select A.db_id,count(*) as n from (select * from uniparc_cro...")
 
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select BB.db_name,AA.n from (select A.db_id,count(*) as n from (select * from uniparc_cross_references t1 inner join crossref_databases t2 on t1.db_id=t2.db_id group by uniparc_id,t2.db_id) A group by A.db_id) AA inner join crossref_databases BB on AA.db_id=BB.db_id order by n DESC;
 
select BB.db_name,AA.n from (select A.db_id,count(*) as n from (select * from uniparc_cross_references t1 inner join crossref_databases t2 on t1.db_id=t2.db_id group by uniparc_id,t2.db_id) A group by A.db_id) AA inner join crossref_databases BB on AA.db_id=BB.db_id order by n DESC;
 
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{| class="wikitable"
 +
! Database
 +
! Count
 +
|-
 +
| EMBL
 +
| 12441
 +
|-
 +
| UniProtKB/
 +
| 11971
 +
|-
 +
| RefSeq
 +
| 11749
 +
|-
 +
| EMBLWGS
 +
| 9526
 +
|-
 +
| SEED
 +
| 9414
 +
|-
 +
| EnsemblBac
 +
| 9071
 +
|-
 +
| PATRIC
 +
| 8246
 +
|-
 +
| EMBL_CON
 +
| 5115
 +
|-
 +
| PRF
 +
| 5008
 +
|-
 +
| UniProtKB/
 +
| 4630
 +
|-
 +
| EPO
 +
| 3054
 +
|-
 +
| EnsemblFun
 +
| 2803
 +
|-
 +
| USPTO
 +
| 2375
 +
|-
 +
| JPO
 +
| 1997
 +
|-
 +
| KIPO
 +
| 455
 +
|-
 +
| PDB
 +
| 227
 +
|-
 +
| EnsemblPro
 +
| 184
 +
|-
 +
| Ensembl
 +
| 15
 +
|-
 +
| SGD
 +
| 13
 +
|-
 +
| WBParaSite
 +
| 11
 +
|-
 +
| UniProtKB/
 +
| 10
 +
|-
 +
| EnsemblPla
 +
| 5
 +
|-
 +
| EMBL_TSA
 +
| 3
 +
|-
 +
| TAIR
 +
| 3
 +
|-
 +
| VEGA
 +
| 2
 +
|-
 +
| EnsemblMet
 +
| 2
 +
|-
 +
| TROME
 +
| 1
 +
|-
 +
| VectorBase
 +
| 1
 +
|}

Revision as of 17:08, 25 April 2019


Cross references from uniparc:


select BB.db_name,AA.n from (select A.db_id,count(*) as n from (select * from uniparc_cross_references t1 inner join crossref_databases t2 on t1.db_id=t2.db_id group by uniparc_id,t2.db_id) A group by A.db_id) AA inner join crossref_databases BB on AA.db_id=BB.db_id order by n DESC;


Database Count
EMBL 12441
UniProtKB/ 11971
RefSeq 11749
EMBLWGS 9526
SEED 9414
EnsemblBac 9071
PATRIC 8246
EMBL_CON 5115
PRF 5008
UniProtKB/ 4630
EPO 3054
EnsemblFun 2803
USPTO 2375
JPO 1997
KIPO 455
PDB 227
EnsemblPro 184
Ensembl 15
SGD 13
WBParaSite 11
UniProtKB/ 10
EnsemblPla 5
EMBL_TSA 3
TAIR 3
VEGA 2
EnsemblMet 2
TROME 1
VectorBase 1